BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017C01SP1|AL427128
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1316 1728 0.0
>3x_Contig1316
Length = 8178
Score = 1728 bits (869), Expect = 0.0
Identities = 889/895 (99%), Gaps = 2/895 (0%)
Strand = Plus / Plus
Query: 1 gatccttgaaactgwcagagtcaataaaaagcggtgatgatcaccaaataaggaaaaaat 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4194 gatccttgaaactgaaagagtcaataaaaagcggtgatgatcaccaaataaggaaaaaat 4253
Query: 61 tacaactagatcactgatccttaatccttatcatgcggtgacacattatcctttctcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4254 tacaactagatcactgatccttaatccttatcatgcggtgacacattatcctttctcttt 4313
Query: 121 caaatgcatgctttccttcttgttcttcctcatccctcacgcagtagatatgcctttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4314 caaatgcatgctttccttcttgttcttcctcatccctcacgcagtagatatgcctttttt 4373
Query: 181 tcgcggttaaaaaaagttttacagaatgaaaaattaatgaaaatgtaatcaagatgaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4374 tcgcggttaaaaaaagttttacagaatgaaaaattaatgaaaatgtaatcaagatgaggt 4433
Query: 241 tttaatgtctgtgcaacaagtttggagaggagtgactaaacacctaagctgtagcctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4434 tttaatgtctgtgcaacaagtttggagaggagtgactaaacacctaagctgtagcctgtt 4493
Query: 301 gattcgagttatcaagttaatataatacctaaaaggtttttggatactttcagtttattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4494 gattcgagttatcaagttaatataatacctaaaaggtttttggatactttcagtttattt 4553
Query: 361 tgcatatagcgatcctaaagaaactgattactaggtgttctacgtaagggaaacaatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4554 tgcatatagcgatcctaaagaaactgattactaggtgttctacgtaagggaaacaatgaa 4613
Query: 421 tcatattttgttacaaaccttgaacaaggatgtttcgacaccacagatacagcagcaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4614 tcatattttgttacaaaccttgaacaaggatgtttcgacaccacagatacagcagcaaca 4673
Query: 481 actcaagcctctgcaacaacaggcaggcactagtaaccgggtaggatctggtgtggcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4674 actcaagcctctgcaacaacaggcaggcactagtaaccgggtaggatctggtgtggcttt 4733
Query: 541 cctcatgggtgacccagtggtcagagatgctaggatgaggctagacatcaagaagtcatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4734 cctcatgggtgacccagtggtcagagatgctaggatgaggctagacatcaagaagtcatt 4793
Query: 601 ttgtgatgaccatatgttctaccctgaaagcaagtttggctggtcaacagtggcaagcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4794 ttgtgatgaccatatgttctaccctgaaagcaagtttggctggtcaacagtggcaagcaa 4853
Query: 661 caccaatgcgagcgcatacattcctgtaggggtgcgttcttatggtttatcaacatacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4854 caccaatgcgagcgcatacattcctgtaggggtgcgttcttatggtttatcaacatacaa 4913
Query: 721 tcaaagagtttctcagcatacgaacttgggcggcggtgtagatattagtgacacaaattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4914 tcaaagagtttctcagcatacgaacttgggcggcggtgtagatattagtgacacaaattc 4973
Query: 781 gaacggattggcaggaccggttcctcacaacacccgtymatgtgtatacggggcagaact 840
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4974 gaacggattggcaggaccggttcctcacaacacccgt-catgtgtatacggggcagaact 5032
Query: 841 tcaatagcatggaacagcacaagcaacaacagcaag-twacccttatctgctgtc 894
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 5033 tcaatagcatggaacagcacaagcaacaacagcaagttaacccttatctgctgtc 5087
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6588
Number of Sequences: 1807
Number of extensions: 6588
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)